BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030A11SP1|AL429157
(828 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1651 1618 0.0
>3x_Contig1651
Length = 13087
Score = 1618 bits (814), Expect = 0.0
Identities = 823/828 (99%)
Strand = Plus / Plus
Query: 1 tgtggatttgacacgacctagtggagaacggacgttgccaagtgagccgcaatggtatga 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 7530 tgtggatttgacacgacctagtggagaacggacgttgccaagtgagctgcaatggtatga 7589
Query: 61 caaatttagtccgaagagagtcgatgacatcgcattgcataagaagaagatagaggaagt 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 7590 caaatttagtccgaagagagttgatgacatcgcattgcataagaagaagatagaggaagt 7649
Query: 121 acggtattatttagagggtatggtctcagggaaatcagatgaacggattcttctgttaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7650 acggtattatttagagggtatggtctcagggaaatcagatgaacggattcttctgttaag 7709
Query: 181 tgggcctgcaggttgttctaaaagtacttgtgttaagcttataagcsatgagatagtgcc 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 7710 tgggcctgcaggttgttctaaaagtacttgtgttaagcttataagcgatgagatagtgcc 7769
Query: 241 tcgttatagagctacgtcaggactcacagtgagtggaagggaagttccgaattttacaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7770 tcgttatagagctacgtcaggactcacagtgagtggaagggaagttccgaattttacaga 7829
Query: 301 atatcttacagatatgagtagcgtttcaccatctgagtcgtttgatgattttttgcttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7830 atatcttacagatatgagtagcgtttcaccatctgagtcgtttgatgattttttgcttca 7889
Query: 361 atctaagtacttaatcggtaggaatttgtcagtmcttcttgtcgaagatctgccgaatgt 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 7890 atctaagtacttaatcggtaggaatttgtcagtacttcttgtcgaagatctgccgaatgt 7949
Query: 421 tttccacgagtcaacgttgaaaaggttcagggagagtattctctcgtggctctttgcttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7950 tttccacgagtcaacgttgaaaaggttcagggagagtattctctcgtggctctttgcttc 8009
Query: 481 tgatcgtctaccaccactggtgatttgtcttactgaatgtcaactactggactcgaattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8010 tgatcgtctaccaccactggtgatttgtcttactgaatgtcaactactggactcgaattc 8069
Query: 541 tactaattcatcatttggaatagattctaccttcatttcagaaacaatcttgggcaaaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8070 tactaattcatcatttggaatagattctaccttcatttcagaaacaatcttgggcaaaga 8129
Query: 601 tatcttgatgcacccgttgttgcatcgaattaagtttaatcccatcaatgcaacattaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8130 tatcttgatgcacccgttgttgcatcgaattaagtttaatcccatcaatgcaacattaat 8189
Query: 661 gacgaagcatttaaagcagataatacagaaagttagaagagaaatcccctcagagaaata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8190 gacgaagcatttaaagcagataatacagaaagttagaagagaaatcccctcagagaaata 8249
Query: 721 ccaaagaagtggcactttcattaagaaccttgcatctagtacaggtgatattcgatctgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8250 ccaaagaagtggcactttcattaagaaccttgcatctagtacaggtgatattcgatctgg 8309
Query: 781 catcgcggcattacaattctggtgcacttctagctttgatgaaamtaa 828
|||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 8310 catcgcggcattacaattctggtgcacttctagctttgatgaaactaa 8357
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5247
Number of Sequences: 1807
Number of extensions: 5247
Number of successful extensions: 23
Number of sequences better than 1.0e-20: 1
length of query: 828
length of database: 10,358,551
effective HSP length: 16
effective length of query: 812
effective length of database: 10,329,639
effective search space: 8387666868
effective search space used: 8387666868
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)